kmr_calc_k_limit — kmr_calc_k

Calculates the k corresponding to a limit relative to the distinct number of k-mers.

kmr_calc_k_limit(res, limit = 0.95)

Arguments

res	a dataframe
limit	numeric between 0 and 1

Value

list k and limit values

Examples

if (interactive()) {

 fa <- system.file("testdata/phix174.fasta",
   package = "kmerize")

 k <- as.integer(seq(5, 17, 2))

 res <- kmr_response(fa, k)
 kmr_calc_k_limit(res)

}